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NET1 neuroepithelial cell transforming 1 [ Gallus gallus (chicken) ]

Gene ID: 416693, updated on 17-Aug-2024

Summary

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Official Symbol
NET1provided by CGNC
Official Full Name
neuroepithelial cell transforming 1provided by CGNC
Primary source
CGNC:6397
See related
Ensembl:ENSGALG00010006853
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (1675662..1727670, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (1681747..1733747, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 13 Neighboring gene calmodulin like 3 Neighboring gene tubulin alpha like 3 Neighboring gene tubulin alpha-3 chain-like Neighboring gene urocortin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuroepithelial cell-transforming gene 1 protein
Names
neuroepithelial cell transforming gene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030648.2 → NP_001025819.1  neuroepithelial cell-transforming gene 1 protein

    See identical proteins and their annotated locations for NP_001025819.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000006
    UniProtKB/TrEMBL
    A0A8V0XWB9, Q5ZJM0
    Related
    ENSGALP00010009308.1, ENSGALT00010016310.1
    Conserved Domains (3) summary
    smart00325
    Location:124 → 300
    RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
    cd13224
    Location:314 → 448
    PH_Net1; Neuroepithelial cell transforming 1 Pleckstrin homology (PH) domain
    pfam00169
    Location:333 → 447
    PH; PH domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1675662..1727670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015284280.3 → XP_015139766.1  neuroepithelial cell-transforming gene 1 protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XRJ2, A0A8V0XZ88
    Related
    ENSGALP00010009314.1, ENSGALT00010016334.1
    Conserved Domains (3) summary
    smart00325
    Location:177 → 353
    RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases
    cd13224
    Location:367 → 501
    PH_Net1; Neuroepithelial cell transforming 1 Pleckstrin homology (PH) domain
    pfam00169
    Location:386 → 500
    PH; PH domain

  2. XM_015284331.4 → XP_015139817.2  neuroepithelial cell-transforming gene 1 protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0XRI8, A0A8V0XZ88
    Related
    ENSGALP00010009309.1, ENSGALT00010016316.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1681747..1733747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046907029.1 → XP_046762985.1  neuroepithelial cell-transforming gene 1 protein isoform X1

    UniProtKB/TrEMBL
    A0A8V0XRJ2, A0A8V0XZ88

  2. XM_046907028.1 → XP_046762984.1  neuroepithelial cell-transforming gene 1 protein isoform X3

    UniProtKB/TrEMBL
    A0A8V0XZ88

  3. XM_046907030.1 → XP_046762986.1  neuroepithelial cell-transforming gene 1 protein isoform X2

    UniProtKB/TrEMBL
    A0A8V0XZ88
Nucleotide Protein Strain
Heading Accession and Version

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