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SYN2 synapsin II [ Gallus gallus (chicken) ]

Gene ID: 415963, updated on 17-Aug-2024

Summary

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Symbol
SYN2provided by CGNC
Full Name
synapsin IIprovided by CGNC
Primary source
CGNC:3682
See related
Ensembl:ENSGALG00010027905
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (4845719..4990748)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (4869972..5015002)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene vestigial like family member 4 Neighboring gene uncharacterized LOC124417164 Neighboring gene TAM41 mitochondrial translocator assembly and maintenance homolog Neighboring gene TIMP metallopeptidase inhibitor 4 Neighboring gene uncharacterized LOC124417163 Neighboring gene peroxisome proliferator-activated receptor gamma Neighboring gene tRNA splicing endonuclease subunit 2 Neighboring gene MKRN2 opposite strand

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synapsin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4845719..4990748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003641989.6 → XP_003642037.4  synapsin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AI71
    Related
    ENSGALP00010041389.1, ENSGALT00010067646.1
    Conserved Domains (2) summary
    PRK10263
    Location:397 → 499
    PRK10263; DNA translocase FtsK; Provisional
    cl17255
    Location:211 → 413
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

  2. XM_040646674.2 → XP_040502608.1  synapsin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8V1ADT0
    Related
    ENSGALP00010041387.1, ENSGALT00010067644.1
    Conserved Domains (2) summary
    PRK10263
    Location:376 → 478
    PRK10263; DNA translocase FtsK; Provisional
    cl17255
    Location:211 → 392
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4869972..5015002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040682110.2 → XP_040538044.1  synapsin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AI71
    Conserved Domains (2) summary
    PRK10263
    Location:397 → 499
    PRK10263; DNA translocase FtsK; Provisional
    cl17255
    Location:211 → 413
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

  2. XM_040682111.2 → XP_040538045.1  synapsin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8V1ADT0
    Conserved Domains (2) summary
    PRK10263
    Location:376 → 478
    PRK10263; DNA translocase FtsK; Provisional
    cl17255
    Location:211 → 392
    CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain
Nucleotide Protein Strain
Heading Accession and Version

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