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HDAC2 histone deacetylase 2 [ Bos taurus (domestic cattle) ]

Gene ID: 407223, updated on 17-Aug-2024

Summary

Official Symbol
HDAC2provided by VGNC
Official Full Name
histone deacetylase 2provided by VGNC
Primary source
VGNC:VGNC:50610
See related
Ensembl:ENSBTAG00000011849
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (36449623..36484815)

Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 5 Neighboring gene uncharacterized LOC132346218 Neighboring gene uncharacterized LOC132346220 Neighboring gene uncharacterized LOC101905407 Neighboring gene myristoylated alanine rich protein kinase C substrate

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

Pathways from PubChem

General protein information

Preferred Names
histone deacetylase 2
NP_001068614.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075146.1NP_001068614.1  histone deacetylase 2

    See identical proteins and their annotated locations for NP_001068614.1

    Status: PROVISIONAL

    Source sequence(s)
    BC120419
    UniProtKB/TrEMBL
    F1MFZ7, Q0VC01
    Related
    ENSBTAP00000080495.1, ENSBTAT00000124420.1
    Conserved Domains (2) summary
    cd10011
    Location:9374
    HDAC2; Histone deacetylase 2 (HDAC2)
    PTZ00063
    Location:9398
    PTZ00063; histone deacetylase; Provisional

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    36449623..36484815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)