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RPL5 ribosomal protein L5 [ Gallus gallus (chicken) ]

Gene ID: 395269, updated on 17-Aug-2024

Summary

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Symbol
RPL5provided by CGNC
Full Name
ribosomal protein L5provided by CGNC
Primary source
CGNC:4424
See related
Ensembl:ENSGALG00010021788
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (13782993..13791058, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (13789650..13797690, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene metal response element binding transcription factor 2 Neighboring gene uncharacterized LOC112532879 Neighboring gene family with sequence similarity 69 member A Neighboring gene small nucleolar RNA SNORD21 Neighboring gene ecotropic viral integration site 5 Neighboring gene uncharacterized LOC121111433 Neighboring gene growth factor independent 1 transcriptional repressor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The primary structure of chicken ribosomal protein L5. Kenmochi N, et al. Biochim Biophys Acta, 1991 Mar 26. PMID 1840495
  2. The structure and complete sequence of the gene encoding chicken ribosomal protein L5. Kenmochi N, et al. Gene, 1992 Oct 1. PMID 1398102
  3. Interaction of the ribosomal protein, L5, with protein phosphatase type 1. Hirano K, et al. J Biol Chem, 1995 Aug 25. PMID 7649987
  4. Proteomic studies of Syk-interacting proteins using a novel amine-specific isotope tag and GFP nanotrap. Galan JA, et al. J Am Soc Mass Spectrom, 2011 Feb. PMID 21472591, Free PMC Article
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5S rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein uL18
Names
60S ribosomal protein L5
NP_989912.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204581.5 → NP_989912.1  large ribosomal subunit protein uL18

    See identical proteins and their annotated locations for NP_989912.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000239
    UniProtKB/Swiss-Prot
    P22451
    UniProtKB/TrEMBL
    A0A8V0ZMH3
    Related
    ENSGALP00010031908.1, ENSGALT00010053002.1
    Conserved Domains (1) summary
    PTZ00069
    Location:1 → 295
    PTZ00069; 60S ribosomal protein L5; Provisional

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    13782993..13791058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    13789650..13797690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P22451.2 GenPept UniProtKB/Swiss-Prot:P22451

Gene LinkOut

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