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CNN00630 DNA replication factor, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3255521, updated on 17-May-2024

Summary

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Gene symbol
CNN00630
Gene description
DNA replication factor, putative
Primary source
FungiDB:CNN00630
Locus tag
CNN00630
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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See CNN00630 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Sequence:
Chromosome: 14; NC_006683.1 (204548..206491)

Chromosome 14 - NC_006683.1Genomic Context describing neighboring genes Neighboring gene expressed protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene kinesin, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006683.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ctf18 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Elg1 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Rad17 RFC-like complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA replication factor, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006683.1 Reference assembly

    Range
    204548..206491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_568598.2 → XP_568598.1  DNA replication factor, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_568598.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0S2M672
    Conserved Domains (4) summary
    cd00009
    Location:23 → 163
    AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
    PRK00440
    Location:11 → 316
    rfc; replication factor C small subunit; Reviewed
    pfam08542
    Location:245 → 314
    Rep_fac_C; Replication factor C C-terminal domain
    pfam16193
    Location:179 → 232
    AAA_assoc_2; AAA C-terminal domain

  2. XM_568597.2 → XP_568597.1  DNA replication factor, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_568597.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5K796
    Conserved Domains (4) summary
    cd00009
    Location:69 → 209
    AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
    PRK00440
    Location:54 → 362
    rfc; replication factor C small subunit; Reviewed
    pfam08542
    Location:291 → 360
    Rep_fac_C; Replication factor C C-terminal domain
    pfam16193
    Location:225 → 278
    AAA_assoc_2; AAA C-terminal domain
Nucleotide Protein
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