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Zfp330 zinc finger protein 330 [ Mus musculus (house mouse) ]

Gene ID: 30932, updated on 11-Apr-2024

Summary

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Official Symbol
Zfp330provided by MGI
Official Full Name
zinc finger protein 330provided by MGI
Primary source
MGI:MGI:1353574
See related
Ensembl:ENSMUSG00000031711 AllianceGenome:MGI:1353574
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Noa36; Znf330
Summary
Predicted to enable zinc ion binding activity. Predicted to be located in chromosome, centromeric region; midbody; and nucleolus. Predicted to be active in nucleus. Is expressed in bladder; male associated reproductive structure; testis; ureter; and urethra of male. Orthologous to human ZNF330 (zinc finger protein 330). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 25.6), CNS E18 (RPKM 18.9) and 24 other tissues See more
Orthologs
human all
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Genomic context

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Location:
8 C2; 8 39.58 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (83490247..83500774, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (82763618..82774145, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene STARR-positive B cell enhancer mm9_chr8:85268437-85268738 Neighboring gene STARR-seq mESC enhancer starr_22068 Neighboring gene STARR-positive B cell enhancer ABC_E5023 Neighboring gene STARR-seq mESC enhancer starr_22070 Neighboring gene heat shock protein 1 (chaperonin) pseudogene 5 Neighboring gene predicted gene, 31545 Neighboring gene ring finger protein 150 Neighboring gene predicted gene, 46045

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Molecular cloning of a zinc finger autoantigen transiently associated with interphase nucleolus and mitotic centromeres and midbodies. Orthologous proteins with nine CXXC motifs highly conserved from nematodes to humans. Bolívar J, et al. J Biol Chem, 1999 Dec 17. PMID 10593942
  2. An Interaction Landscape of Ubiquitin Signaling. Zhang X, et al. Mol Cell, 2017 Mar 2. PMID 28190767
  3. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, et al. Science, 2004 Dec 24. PMID 15618518
  4. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article
  5. GUDMAP: the genitourinary developmental molecular anatomy project. McMahon AP, et al. J Am Soc Nephrol, 2008 Apr. PMID 18287559

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC6718, MGC41503, MGC103365

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
  
located_in chromosome, centromeric region ISO
Inferred from Sequence Orthology
more info
  
located_in midbody ISO
Inferred from Sequence Orthology
more info
  
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
zinc finger protein 330
Names
nucleolar autoantigen 36
nucleolar cysteine-rich protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001368343.1 → NP_001355272.1  zinc finger protein 330 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC124757

  2. NM_001368344.1 → NP_001355273.1  zinc finger protein 330 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC124757

  3. NM_001368345.1 → NP_001355274.1  zinc finger protein 330 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC124757

  4. NM_001368346.1 → NP_001355275.1  zinc finger protein 330 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC124757

  5. NM_145600.2 → NP_663575.1  zinc finger protein 330 isoform 1

    See identical proteins and their annotated locations for NP_663575.1

    Status: VALIDATED

    Source sequence(s)
    AC124757
    Consensus CDS
    CCDS22447.1
    UniProtKB/Swiss-Prot
    Q8C389, Q8K2M4, Q922H9
    Related
    ENSMUSP00000034147.4, ENSMUST00000034147.4
    Conserved Domains (1) summary
    pfam06524
    Location:1 → 290
    NOA36; NOA36 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    83490247..83500774 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q922H9.1 GenPept UniProtKB/Swiss-Prot:Q922H9

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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