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MYOG myogenin [ Lontra canadensis (Northern American river otter) ]

Gene ID: 116879694, updated on 18-Mar-2024

Summary

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Gene symbol
MYOG
Gene description
myogenin
Gene type
protein coding
RefSeq status
MODEL
Organism
Lontra canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Lontra
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current GSC_riverotter_1.0 (GCF_010015895.1) Unplaced Scaffold NW_022631057.1 (9630910..9633114, complement)

NW_022631057.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 183A Neighboring gene PTPRF interacting protein alpha 4 Neighboring gene 60S ribosomal protein L9-like Neighboring gene adenosine A1 receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022631057 Unplaced Scaffold Reference GSC_riverotter_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myogenin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lontra canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GSC_riverotter_1.0

Genomic

  1. NW_022631057.1 Reference GSC_riverotter_1.0

    Range
    9630910..9633114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032878085.1 → XP_032733976.1  myogenin isoform X1

    Conserved Domains (2) summary
    smart00520
    Location:22 → 107
    BASIC; Basic domain in HLH proteins of MYOD family
    cd18935
    Location:102 → 160
    bHLH_TS_MYOG_Myf4; basic helix-loop-helix (bHLH) domain found in myogenin (MYOG) and similar proteins

  2. XM_032878086.1 → XP_032733977.1  myogenin isoform X2

    Conserved Domains (2) summary
    smart00520
    Location:1 → 86
    BASIC; Basic domain in HLH proteins of MYOD family
    cd18935
    Location:81 → 139
    bHLH_TS_MYOG_Myf4; basic helix-loop-helix (bHLH) domain found in myogenin (MYOG) and similar proteins
Nucleotide Protein
Heading Accession and Version

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