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SOCS7 suppressor of cytokine signaling 7 [ Zalophus californianus (California sea lion) ]

Gene ID: 113939561, updated on 15-Mar-2024

Summary

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Gene symbol
SOCS7
Gene description
suppressor of cytokine signaling 7
See related
EnsemblRapid:ENSZCAG00025022272
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 16 NC_045610.1 (38088503..38119469)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020875730.1 (22984486..23015457, complement)

Chromosome 16 - NC_045610.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L45 Neighboring gene G protein-coupled receptor 179 Neighboring gene Rho GTPase activating protein 23 Neighboring gene SRC kinase signaling inhibitor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
suppressor of cytokine signaling 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045610.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    38088503..38119469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027625852.2 → XP_027481653.1  suppressor of cytokine signaling 7 isoform X1

    UniProtKB/TrEMBL
    A0A6J2FNP0
    Related
    ENSZCAP00025035208.1, ENSZCAT00025039743.1
    Conserved Domains (2) summary
    cd10388
    Location:450 → 550
    SH2_SOCS7; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins
    cd03741
    Location:574 → 622
    SOCS_SOCS7; SOCS (suppressors of cytokine signaling) box of SOCS7-like proteins. Together with CIS1, the CIS/SOCS family of proteins is characterized by the presence of a C-terminal SOCS box and a central SH2 domain. SOCS7 is important in the functioning of neuronal ...

  2. XM_027625853.2 → XP_027481654.1  suppressor of cytokine signaling 7 isoform X2

    UniProtKB/TrEMBL
    A0A6J2FNZ6
    Related
    ENSZCAP00025035234.1, ENSZCAT00025039771.1
    Conserved Domains (2) summary
    cd10388
    Location:416 → 516
    SH2_SOCS7; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins
    cd03741
    Location:540 → 588
    SOCS_SOCS7; SOCS (suppressors of cytokine signaling) box of SOCS7-like proteins. Together with CIS1, the CIS/SOCS family of proteins is characterized by the presence of a C-terminal SOCS box and a central SH2 domain. SOCS7 is important in the functioning of neuronal ...

  3. XM_027625854.2 → XP_027481655.1  suppressor of cytokine signaling 7 isoform X3

    UniProtKB/TrEMBL
    A0A6J2FNQ1
    Related
    ENSZCAP00025035249.1, ENSZCAT00025039787.1
Nucleotide Protein
Heading Accession and Version

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