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DTNB dystrobrevin beta [ Zalophus californianus (California sea lion) ]

Gene ID: 113938065, updated on 15-Mar-2024

Summary

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Gene symbol
DTNB
Gene description
dystrobrevin beta
See related
EnsemblRapid:ENSZCAG00025009173
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
24
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 8 NC_045602.1 (20784670..21002310, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020875357.1 (20455984..20673612, complement)

Chromosome 8 - NC_045602.1Genomic Context describing neighboring genes Neighboring gene proopiomelanocortin Neighboring gene DNA methyltransferase 3 alpha Neighboring gene 60S ribosomal protein L39-like Neighboring gene basic salivary proline-rich protein 1-like Neighboring gene 60S ribosomal protein L17-like Neighboring gene 40S ribosomal protein S11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dystrobrevin beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045602.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    20784670..21002310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027623160.2 → XP_027478961.2  dystrobrevin beta isoform X3

    UniProtKB/TrEMBL
    A0A6J2FG52
    Related
    ENSZCAP00025014610.1, ENSZCAT00025016633.1
    Conserved Domains (3) summary
    PRK00286
    Location:392 → 564
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    cd02334
    Location:287 → 335
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:100 → 260
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  2. XM_027623159.2 → XP_027478960.2  dystrobrevin beta isoform X2

    UniProtKB/TrEMBL
    A0A6J2FG50
    Related
    ENSZCAP00025014589.1, ENSZCAT00025016610.1
    Conserved Domains (3) summary
    PRK00286
    Location:392 → 564
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    cd02334
    Location:287 → 335
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:100 → 260
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  3. XM_027623162.1 → XP_027478963.1  dystrobrevin beta isoform X5

    UniProtKB/TrEMBL
    A0A6J2FG48

  4. XM_027623161.2 → XP_027478962.2  dystrobrevin beta isoform X4

    UniProtKB/TrEMBL
    A0A6J2FG44
    Related
    ENSZCAP00025014617.1, ENSZCAT00025016640.1
    Conserved Domains (3) summary
    PRK00286
    Location:392 → 564
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    cd02334
    Location:287 → 335
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:100 → 260
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

  5. XM_027623158.2 → XP_027478959.2  dystrobrevin beta isoform X1

    UniProtKB/TrEMBL
    A0A6J2FG46
    Conserved Domains (3) summary
    PRK00286
    Location:392 → 564
    xseA; exodeoxyribonuclease VII large subunit; Reviewed
    cd02334
    Location:287 → 335
    ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
    cd16244
    Location:100 → 260
    EFh_DTN; EF-hand-like motif found in dystrobrevins and similar proteins

RNA

  1. XR_003524809.2 RNA Sequence

  2. XR_003524806.2 RNA Sequence

  3. XR_003524810.2 RNA Sequence

  4. XR_003524807.2 RNA Sequence

  5. XR_003524808.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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