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SRSF4 serine and arginine rich splicing factor 4 [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

Gene ID: 113621925, updated on 15-Mar-2024

Summary

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Gene symbol
SRSF4
Gene description
serine and arginine rich splicing factor 4
See related
EnsemblRapid:ENSLOBG00000005564
Gene type
protein coding
RefSeq status
MODEL
Organism
Lagenorhynchus obliquidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837953.1 (30069802..30095721)

NW_020837953.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type U Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial trans-2-enoyl-CoA reductase Neighboring gene transmembrane protein 200B Neighboring gene erythrocyte membrane protein band 4.1 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene opioid receptor delta 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020837953 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM367639v1 Primary Assembly

Genomic

  1. NW_020837953.1 Reference ASM367639v1 Primary Assembly

    Range
    30069802..30095721
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027109394.1 → XP_026965195.1  serine/arginine-rich splicing factor 4 isoform X1

    Related
    ENSLOBP00000007414.1, ENSLOBT00000008194.1
    Conserved Domains (2) summary
    cd12337
    Location:3 → 72
    RRM1_SRSF4_like; RNA recognition motif 1 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cd12600
    Location:104 → 175
    RRM2_SRSF4_like; RNA recognition motif 2 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

  2. XM_027109395.1 → XP_026965196.1  serine/arginine-rich splicing factor 4 isoform X2

    Conserved Domains (1) summary
    cl17169
    Location:29 → 87
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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