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ahi1 Abelson helper integration site 1 [ Electrophorus electricus (electric eel) ]

Gene ID: 113578573, updated on 15-Mar-2024

Summary

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Gene symbol
ahi1
Gene description
Abelson helper integration site 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
27
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 13 NC_049547.1 (10570513..10587344)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020826117.1 (2611..9966, complement)

Chromosome 13 - NC_049547.1Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 3b Neighboring gene CDC42 binding protein kinase alpha (DMPK-like) a Neighboring gene lefty2 Neighboring gene solute carrier family 18 member B1 Neighboring gene TUB like protein 4b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
jouberin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049547.1 Reference fEleEle1.pri

    Range
    10570513..10587344
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035532611.1 → XP_035388504.1  jouberin

    Conserved Domains (4) summary
    PTZ00121
    Location:7 → 304
    PTZ00121; MAEBL; Provisional
    cd11812
    Location:1035 → 1085
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    cd00200
    Location:549 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:560 → 600
    7WD40; WD40 repeat [structural motif]

  2. XM_035532610.1 → XP_035388503.1  jouberin

    Conserved Domains (4) summary
    PTZ00121
    Location:7 → 304
    PTZ00121; MAEBL; Provisional
    cd11812
    Location:1035 → 1085
    SH3_AHI-1; Src Homology 3 domain of Abelson helper integration site-1 (AHI-1)
    cd00200
    Location:549 → 858
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:560 → 600
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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