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fndc1 fibronectin type III domain containing 1 [ Electrophorus electricus (electric eel) ]

Gene ID: 113570513, updated on 15-Mar-2024

Summary

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Gene symbol
fndc1
Gene description
fibronectin type III domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Electrophorus electricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Gymnotiformes; Gymnotoidei; Gymnotidae; Electrophorus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
24
Annotation release Status Assembly Chr Location
101 current fEleEle1.pri (GCF_013358815.1) 3 NC_049537.1 (24466456..24502320, complement)
100 previous assembly Ee_SOAP_WITH_SSPACE (GCF_003665695.1) Unplaced Scaffold NW_020825972.1 (196548..232089)

Chromosome 3 - NC_049537.1Genomic Context describing neighboring genes Neighboring gene acetyl-CoA acetyltransferase 2 Neighboring gene WT1 associated protein Neighboring gene superoxide dismutase 2, mitochondrial Neighboring gene ciliary microtubule inner protein 2C Neighboring gene otoferlin a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibronectin type III domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Electrophorus electricus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEleEle1.pri

Genomic

  1. NC_049537.1 Reference fEleEle1.pri

    Range
    24466456..24502320 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026998948.2 → XP_026854749.2  fibronectin type III domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A4W4F6P6
    Conserved Domains (1) summary
    cd00063
    Location:322 → 413
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_026998947.2 → XP_026854748.2  fibronectin type III domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A4W4F6P6
    Conserved Domains (1) summary
    cd00063
    Location:351 → 442
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  3. XM_026998946.2 → XP_026854747.2  fibronectin type III domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A4W4F6P6
    Conserved Domains (1) summary
    cd00063
    Location:351 → 442
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  4. XM_026998949.2 → XP_026854750.2  fibronectin type III domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A4W4F6P6
    Conserved Domains (1) summary
    cd00063
    Location:253 → 344
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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