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dmap1 DNA methyltransferase 1 associated protein 1 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113534880, updated on 6-Jun-2024

Summary

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Gene symbol
dmap1
Gene description
DNA methyltransferase 1 associated protein 1
Locus tag
PHYPO_G00228910
See related
EnsemblRapid:ENSPHYG00025022819
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
human zebrafish all
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Genomic context

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See dmap1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 8 NC_069717.1 (1835403..1849727, complement)

Chromosome 8 - NC_069717.1Genomic Context describing neighboring genes Neighboring gene guanylate kinase 1b Neighboring gene ring finger protein 220b Neighboring gene obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF a Neighboring gene uncharacterized LOC113535244

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069717.1 Chromosome 8 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NuA4 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA methyltransferase 1-associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069717.1 Reference fPanHyp1.pri

    Range
    1835403..1849727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053236473.1 → XP_053092448.1  DNA methyltransferase 1-associated protein 1

    UniProtKB/TrEMBL
    A0A5N5NK67
    Related
    ENSPHYP00025053224.1, ENSPHYT00025058085.1
Nucleotide Protein
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