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plce1 phospholipase C, epsilon 1 [ Pangasianodon hypophthalmus (striped catfish) ]

Gene ID: 113527060, updated on 6-Jun-2024

Summary

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Gene symbol
plce1
Gene description
phospholipase C, epsilon 1
Locus tag
PHYPO_G00032500
See related
EnsemblRapid:ENSPHYG00025019606
Gene type
protein coding
RefSeq status
MODEL
Organism
Pangasianodon hypophthalmus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Pangasiidae; Pangasianodon
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2023_02 current fPanHyp1.pri (GCF_027358585.1) 12 NC_069721.1 (6260339..6346759)

Chromosome 12 - NC_069721.1Genomic Context describing neighboring genes Neighboring gene leucine-rich, glioma inactivated 1b Neighboring gene solute carrier family 35 member G1 Neighboring gene uncharacterized LOC128319480 Neighboring gene NOC3-like DNA replication regulator Neighboring gene TBC1 domain family, member 12b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069721.1 Chromosome 12 Reference fPanHyp1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027358585.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPanHyp1.pri

Genomic

  1. NC_069721.1 Reference fPanHyp1.pri

    Range
    6260339..6346759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053238608.1 → XP_053094583.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X1

    UniProtKB/TrEMBL
    A0A5N5MK82

  2. XM_053238612.1 → XP_053094587.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X4

    UniProtKB/TrEMBL
    A0A5N5MK82

  3. XM_053238610.1 → XP_053094585.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X2

    UniProtKB/TrEMBL
    A0A5N5MK82

  4. XM_053238611.1 → XP_053094586.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X3

    UniProtKB/TrEMBL
    A0A5N5MK82

  5. XM_053238617.1 → XP_053094592.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X9

    UniProtKB/TrEMBL
    A0A5N5MK82

  6. XM_053238613.1 → XP_053094588.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X5

    UniProtKB/TrEMBL
    A0A5N5MK82
    Related
    ENSPHYP00025048043.1, ENSPHYT00025051459.1

  7. XM_053238614.1 → XP_053094589.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X6

    UniProtKB/TrEMBL
    A0A5N5MK82
    Related
    ENSPHYP00025048033.1, ENSPHYT00025051446.1

  8. XM_053238609.1 → XP_053094584.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X1

    UniProtKB/TrEMBL
    A0A5N5MK82

  9. XM_053238616.1 → XP_053094591.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X8

  10. XM_053238615.1 → XP_053094590.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 isoform X7

    UniProtKB/TrEMBL
    A0A5N5MK82
    Related
    ENSPHYP00025047892.1, ENSPHYT00025051256.1

RNA

  1. XR_008302933.1 RNA Sequence

Nucleotide Protein
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