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EYA4 EYA transcriptional coactivator and phosphatase 4 [ Athene cunicularia (burrowing owl) ]

Gene ID: 113478149, updated on 3-Aug-2024

Summary

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Gene symbol
EYA4
Gene description
EYA transcriptional coactivator and phosphatase 4
See related
Ensembl:ENSACUG00000005107
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
24
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 3 Unlocalized Scaffold NW_020799097.1 (61656722..61812306)

NW_020799097.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD100 Neighboring gene small nucleolar RNA SNORA33 Neighboring gene ribosomal protein S12 Neighboring gene transcription factor 21 Neighboring gene TATA-box binding protein like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799097 Chromosome 3 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eyes absent homolog 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799097.1 Reference athCun1

    Range
    61656722..61812306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026845055.1 → XP_026700856.1  eyes absent homolog 4 isoform X2

  2. XM_026845058.1 → XP_026700859.1  eyes absent homolog 4 isoform X5

    Conserved Domains (2) summary
    cd02601
    Location:367 → 638
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
    cl26809
    Location:162 → 339
    Sec23_BS; Sec23/Sec24 beta-sandwich domain

  3. XM_026845068.1 → XP_026700869.1  eyes absent homolog 4 isoform X14

  4. XM_026845064.1 → XP_026700865.1  eyes absent homolog 4 isoform X10

  5. XM_026845054.1 → XP_026700855.1  eyes absent homolog 4 isoform X1

  6. XM_026845057.1 → XP_026700858.1  eyes absent homolog 4 isoform X4

  7. XM_026845059.1 → XP_026700860.1  eyes absent homolog 4 isoform X6

    Conserved Domains (2) summary
    cd02601
    Location:366 → 637
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
    cl26809
    Location:162 → 338
    Sec23_BS; Sec23/Sec24 beta-sandwich domain

  8. XM_026845056.1 → XP_026700857.1  eyes absent homolog 4 isoform X3

  9. XM_026845061.1 → XP_026700862.1  eyes absent homolog 4 isoform X8

  10. XM_026845066.1 → XP_026700867.1  eyes absent homolog 4 isoform X12

  11. XM_026845060.1 → XP_026700861.1  eyes absent homolog 4 isoform X7

  12. XM_026845063.1 → XP_026700864.1  eyes absent homolog 4 isoform X9

    UniProtKB/TrEMBL
    A0A663M698
    Related
    ENSACUP00000007444.1, ENSACUT00000007968.1

  13. XM_026845067.1 → XP_026700868.1  eyes absent homolog 4 isoform X13

    Conserved Domains (2) summary
    cd02601
    Location:319 → 590
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
    cl26809
    Location:49 → 291
    Sec23_BS; Sec23/Sec24 beta-sandwich domain

  14. XM_026845069.1 → XP_026700870.1  eyes absent homolog 4 isoform X11

  15. XM_026845065.1 → XP_026700866.1  eyes absent homolog 4 isoform X11

RNA

  1. XR_003398009.1 RNA Sequence

  2. XR_003398010.1 RNA Sequence

Nucleotide Protein
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