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AHR aryl hydrocarbon receptor [ Athene cunicularia (burrowing owl) ]

Gene ID: 113476308, updated on 3-Aug-2024

Summary

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Gene symbol
AHR
Gene description
aryl hydrocarbon receptor
See related
Ensembl:ENSACUG00000009768
Gene type
protein coding
RefSeq status
MODEL
Organism
Athene cunicularia
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes; Strigidae; Athene
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
100 current athCun1 (GCF_003259725.1) 2 Unlocalized Scaffold NW_020799095.1 (20812204..20871404, complement)

NW_020799095.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 13 Neighboring gene histone-lysine N-methyltransferase SETMAR-like Neighboring gene U6 spliceosomal RNA Neighboring gene anterior gradient 3, protein disulphide isomerase family member

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020799095 Chromosome 2 Unlocalized Scaffold Reference athCun1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aryl hydrocarbon receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Athene cunicularia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference athCun1

Genomic

  1. NW_020799095.1 Reference athCun1

    Range
    20812204..20871404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026841736.1 → XP_026697537.1  aryl hydrocarbon receptor

    UniProtKB/TrEMBL
    A0A663MSB5
    Related
    ENSACUP00000014581.1, ENSACUT00000015564.1
    Conserved Domains (2) summary
    pfam00989
    Location:5 → 117
    PAS; PAS fold
    pfam08447
    Location:191 → 273
    PAS_3; PAS fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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