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Zbtb8os zinc finger and BTB domain containing 8 opposite strand [ Urocitellus parryii (Arctic ground squirrel) ]

Gene ID: 113195328, updated on 15-Mar-2024

Summary

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Gene symbol
Zbtb8os
Gene description
zinc finger and BTB domain containing 8 opposite strand
See related
Ensembl:ENSUPAG00010005380
Gene type
protein coding
RefSeq status
MODEL
Organism
Urocitellus parryii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540231.1 (452315..468625, complement)

NW_020540231.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 8B Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene RB binding protein 4, chromatin remodeling factor Neighboring gene syncoilin, intermediate filament protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020540231 Unplaced Scaffold Reference ASM342692v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tRNA-splicing ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein archease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM342692v1

Genomic

  1. NW_020540231.1 Reference ASM342692v1

    Range
    452315..468625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026406821.1 → XP_026262606.1  protein archease isoform X1

    UniProtKB/TrEMBL
    A0A8D2H035
    Related
    ENSUPAP00010006702.1, ENSUPAT00010007657.1
    Conserved Domains (1) summary
    pfam01951
    Location:31 → 167
    Archease; Archease protein family (MTH1598/TM1083)

  2. XM_026406824.1 → XP_026262609.1  protein archease isoform X4

    Conserved Domains (1) summary
    pfam01951
    Location:5 → 131
    Archease; Archease protein family (MTH1598/TM1083)

  3. XM_026406823.1 → XP_026262608.1  protein archease isoform X3

    UniProtKB/TrEMBL
    A0A8D2H530
    Related
    ENSUPAP00010006710.1, ENSUPAT00010007667.1
    Conserved Domains (1) summary
    pfam01951
    Location:31 → 109
    Archease; Archease protein family (MTH1598/TM1083)

  4. XM_026406822.1 → XP_026262607.1  protein archease isoform X2

    Conserved Domains (1) summary
    pfam01951
    Location:31 → 139
    Archease; Archease protein family (MTH1598/TM1083)
Nucleotide Protein
Heading Accession and Version

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