U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

fndc1 fibronectin type III domain containing 1 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113137333, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
fndc1
Gene description
fibronectin type III domain containing 1
See related
Ensembl:ENSMAMG00000007183
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See fndc1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
21
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 24 NC_046656.1 (18933916..18963971, complement)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535912.1 (18933916..18963971, complement)

Chromosome 24 - NC_046656.1Genomic Context describing neighboring genes Neighboring gene WT1 associated protein Neighboring gene superoxide dismutase 2, mitochondrial Neighboring gene otoferlin a Neighboring gene dynein regulatory complex subunit 1 homolog (Chlamydomonas)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
fibronectin type III domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046656.1 Reference fMasArm1.2 Primary Assembly

    Range
    18933916..18963971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026318913.1 → XP_026174698.1  fibronectin type III domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q3LMS4
    Conserved Domains (3) summary
    pfam05539
    Location:740 → 897
    Pneumo_att_G; Pneumovirinae attachment membrane glycoprotein G
    pfam06933
    Location:704 → 801
    SSP160; Special lobe-specific silk protein SSP160
    cd00063
    Location:330 → 421
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_026318911.1 → XP_026174696.1  fibronectin type III domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q3LMS4, A0A3Q3RUW6
    Related
    ENSMAMP00000010630.1, ENSMAMT00000010904.2
    Conserved Domains (3) summary
    pfam05539
    Location:741 → 898
    Pneumo_att_G; Pneumovirinae attachment membrane glycoprotein G
    pfam06933
    Location:705 → 802
    SSP160; Special lobe-specific silk protein SSP160
    cd00063
    Location:331 → 422
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.