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tbrg1 transforming growth factor beta regulator 1 [ Mastacembelus armatus (zig-zag eel) ]

Gene ID: 113133947, updated on 15-Mar-2024

Summary

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Gene symbol
tbrg1
Gene description
transforming growth factor beta regulator 1
See related
Ensembl:ENSMAMG00000000876
Gene type
protein coding
RefSeq status
MODEL
Organism
Mastacembelus armatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Synbranchiformes; Mastacembelidae; Mastacembelus
Orthologs
human zebrafish all
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Genomic context

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See tbrg1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
101 current fMasArm1.2 (GCF_900324485.2) 13 NC_046645.1 (2679211..2687028, complement)
100 previous assembly fMasArm1.1 (GCF_900324485.1) Unplaced Scaffold NW_020535858.1 (22355170..22362986, complement)

Chromosome 13 - NC_046645.1Genomic Context describing neighboring genes Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 Neighboring gene U4 spliceosomal RNA Neighboring gene matrix metalloproteinase-20-like Neighboring gene sialic acid acetylesterase Neighboring gene matrix metallopeptidase 13b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming growth factor beta regulator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mastacembelus armatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fMasArm1.2 Primary Assembly

Genomic

  1. NC_046645.1 Reference fMasArm1.2 Primary Assembly

    Range
    2679211..2687028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026313041.2 → XP_026168826.1  transforming growth factor beta regulator 1

    UniProtKB/TrEMBL
    A0A3Q3KV14, A0A7N8Y7N7
    Conserved Domains (3) summary
    pfam05066
    Location:53 → 119
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam05964
    Location:340 → 390
    FYRN; F/Y-rich N-terminus
    pfam05965
    Location:396 → 470
    FYRC; F/Y rich C-terminus

  2. XM_026313032.1 → XP_026168817.1  transforming growth factor beta regulator 1

    UniProtKB/TrEMBL
    A0A3Q3KV14, A0A7N8Y7N7
    Conserved Domains (3) summary
    pfam05066
    Location:53 → 119
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam05964
    Location:340 → 390
    FYRN; F/Y-rich N-terminus
    pfam05965
    Location:396 → 470
    FYRC; F/Y rich C-terminus

  3. XM_026313024.1 → XP_026168809.1  transforming growth factor beta regulator 1

    UniProtKB/TrEMBL
    A0A3Q3KV14, A0A7N8Y7N7
    Related
    ENSMAMP00000001219.1, ENSMAMT00000001246.2
    Conserved Domains (3) summary
    pfam05066
    Location:53 → 119
    HARE-HTH; HB1, ASXL, restriction endonuclease HTH domain
    pfam05964
    Location:340 → 390
    FYRN; F/Y-rich N-terminus
    pfam05965
    Location:396 → 470
    FYRC; F/Y rich C-terminus
Nucleotide Protein
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