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mpnd MPN domain containing [ Astatotilapia calliptera (eastern happy) ]

Gene ID: 113016686, updated on 15-Mar-2024

Summary

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Gene symbol
mpnd
Gene description
MPN domain containing
See related
Ensembl:ENSACLG00000021936
Gene type
protein coding
RefSeq status
MODEL
Organism
Astatotilapia calliptera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Astatotilapia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 23
Exon count:
13
Annotation release Status Assembly Chr Location
100 current fAstCal1.2 (GCF_900246225.1) 23 NC_039323.1 (10572915..10581861)

Chromosome 23 - NC_039323.1Genomic Context describing neighboring genes Neighboring gene granzyme B(G,H)-like Neighboring gene galectin-3-binding protein B-like Neighboring gene SH3-domain GRB2-like 1b Neighboring gene RAR-related orphan receptor C a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039323.1 Chromosome 23 Reference fAstCal1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BRCA1-A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of BRISC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MPN domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astatotilapia calliptera Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAstCal1.2 Primary Assembly

Genomic

  1. NC_039323.1 Reference fAstCal1.2 Primary Assembly

    Range
    10572915..10581861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026159700.1 → XP_026015485.1  MPN domain-containing protein

    UniProtKB/TrEMBL
    A0A3P8QSC5, A0A3P8QTI3
    Related
    ENSACLP00000032408.1, ENSACLT00000033169.1
    Conserved Domains (2) summary
    cd08067
    Location:219 → 403
    MPN_2A_DUB; Mov34/MPN/PAD-1 family: Histone H2A deubiquitinase
    pfam18755
    Location:30 → 139
    RAMA; Restriction Enzyme Adenine Methylase Associated
Nucleotide Protein
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