U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRAF1 TNF receptor associated factor 1 [ Dromaius novaehollandiae (emu) ]

Gene ID: 112979923, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
TRAF1
Gene description
TNF receptor associated factor 1
See related
Ensembl:ENSDNVG00000011761
Gene type
protein coding
RefSeq status
MODEL
Organism
Dromaius novaehollandiae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae; Dromaius
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_04 current bDroNov1.hap1 (GCF_036370855.1) 20 NC_088117.1 (11795879..11830370, complement)
100 previous assembly droNov1 (GCF_003342905.1) Unplaced Scaffold NW_020451850.1 (571932..610803)

Chromosome 20 - NC_088117.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112979947 Neighboring gene cutA divalent cation tolerance homolog Neighboring gene PHD finger protein 19 Neighboring gene complement C5 Neighboring gene centriolin Neighboring gene RAB14, member RAS oncogene family

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
TNF receptor-associated factor 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036370855.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDroNov1.hap1

Genomic

  1. NC_088117.1 Reference bDroNov1.hap1

    Range
    11795879..11830370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026094472.2 → XP_025950257.2  TNF receptor-associated factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C4K231

  2. XM_064523902.1 → XP_064379972.1  TNF receptor-associated factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C4K2X3

  3. XM_064523901.1 → XP_064379971.1  TNF receptor-associated factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C4K2X3

  4. XM_064523900.1 → XP_064379970.1  TNF receptor-associated factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C4K2X3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.