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SGPP1 sphingosine-1-phosphate phosphatase 1 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112976905, updated on 15-Mar-2024

Summary

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Gene symbol
SGPP1
Gene description
sphingosine-1-phosphate phosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020451071.1 (1524795..1546479)

NW_020451071.1Genomic Context describing neighboring genes Neighboring gene estrogen receptor 2 Neighboring gene spectrin repeat containing nuclear envelope protein 2 Neighboring gene uncharacterized LOC112976930 Neighboring gene WD repeat domain 89

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020451071 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020451071.1 Reference aptRow1

    Range
    1524795..1546479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026088639.1 → XP_025944424.1  sphingosine-1-phosphate phosphatase 1

    Conserved Domains (1) summary
    cd03388
    Location:51 → 200
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

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