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TP63 tumor protein p63 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112968503, updated on 15-Mar-2024

Summary

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Gene symbol
TP63
Gene description
tumor protein p63
See related
Ensembl:ENSARWG00000007294
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020449641.1 (3227883..3339685)

NW_020449641.1Genomic Context describing neighboring genes Neighboring gene BCL6 transcription repressor Neighboring gene LIM domain containing preferred translocation partner in lipoma Neighboring gene prolyl 3-hydroxylase 2 Neighboring gene claudin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020449641 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein tetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor protein 63

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020449641.1 Reference aptRow1

    Range
    3227883..3339685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026070863.1 → XP_025926648.1  tumor protein 63 isoform X1

    Related
    ENSARWP00000010498.1, ENSARWT00000011968.1
    Conserved Domains (3) summary
    cd09572
    Location:543 → 607
    SAM_tumor-p63; SAM domain of tumor-p63 proteins
    pfam00870
    Location:163 → 358
    P53; P53 DNA-binding domain
    pfam07710
    Location:392 → 431
    P53_tetramer; P53 tetramerisation motif

  2. XM_026070865.1 → XP_025926650.1  tumor protein 63 isoform X3

    Conserved Domains (3) summary
    cd09572
    Location:500 → 564
    SAM_tumor-p63; SAM domain of tumor-p63 proteins
    pfam00870
    Location:124 → 319
    P53; P53 DNA-binding domain
    pfam07710
    Location:349 → 388
    P53_tetramer; P53 tetramerisation motif

  3. XM_026070866.1 → XP_025926651.1  tumor protein 63 isoform X4

    Conserved Domains (2) summary
    pfam00870
    Location:124 → 319
    P53; P53 DNA-binding domain
    pfam07710
    Location:353 → 392
    P53_tetramer; P53 tetramerisation motif

  4. XM_026070867.1 → XP_025926652.1  tumor protein 63 isoform X5

    Conserved Domains (2) summary
    pfam00870
    Location:124 → 319
    P53; P53 DNA-binding domain
    pfam07710
    Location:353 → 392
    P53_tetramer; P53 tetramerisation motif

  5. XM_026070864.1 → XP_025926649.1  tumor protein 63 isoform X2

    Related
    ENSARWP00000010500.1, ENSARWT00000011970.1
    Conserved Domains (3) summary
    cd09572
    Location:449 → 513
    SAM_tumor-p63; SAM domain of tumor-p63 proteins
    pfam00870
    Location:69 → 264
    P53; P53 DNA-binding domain
    pfam07710
    Location:298 → 337
    P53_tetramer; P53 tetramerisation motif
Nucleotide Protein
Heading Accession and Version

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