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TBL1XR1 TBL1X/Y related 1 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112963781, updated on 15-Mar-2024

Summary

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Gene symbol
TBL1XR1
Gene description
TBL1X/Y related 1
See related
Ensembl:ENSARWG00000017194
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020447197.1 (1976060..2096939)

NW_020447197.1Genomic Context describing neighboring genes Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 2 Neighboring gene uncharacterized LOC112963918 Neighboring gene N-acetylated alpha-linked acidic dipeptidase like 2 Neighboring gene neuroligin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020447197 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box-like/WD repeat-containing protein TBL1XR1
Names
TBL1X receptor 1
transducin beta like 1 X-linked receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020447197.1 Reference aptRow1

    Range
    1976060..2096939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026061144.1 → XP_025916929.1  F-box-like/WD repeat-containing protein TBL1XR1

    Related
    ENSARWP00000025367.1, ENSARWT00000028726.1
    Conserved Domains (4) summary
    cd00200
    Location:163 → 469
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:227 → 263
    7WD40; WD40 repeat [structural motif]
    pfam08513
    Location:6 → 32
    LisH
    cl27623
    Location:435 → 513
    DPPIV_N; Dipeptidyl peptidase IV (DPP IV) N-terminal region
Nucleotide Protein
Heading Accession and Version

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