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SRSF5 serine and arginine rich splicing factor 5 [ Apteryx rowi (Okarito brown kiwi) ]

Gene ID: 112963667, updated on 15-Mar-2024

Summary

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Gene symbol
SRSF5
Gene description
serine and arginine rich splicing factor 5
See related
Ensembl:ENSARWG00000001458
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx rowi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aptRow1 (GCF_003343035.1) Unplaced Scaffold NW_020448008.1 (628506..633266, complement)

NW_020448008.1Genomic Context describing neighboring genes Neighboring gene SPARC related modular calcium binding 1 Neighboring gene uncharacterized LOC112963669 Neighboring gene solute carrier family 10 member 1 Neighboring gene sushi domain containing 6 Neighboring gene uncharacterized LOC112963666

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020448008 Unplaced Scaffold Reference aptRow1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx rowi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aptRow1

Genomic

  1. NW_020448008.1 Reference aptRow1

    Range
    628506..633266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026060953.1 → XP_025916738.1  serine/arginine-rich splicing factor 5 isoform X2

    Conserved Domains (2) summary
    cd12337
    Location:5 → 71
    RRM1_SRSF4_like; RNA recognition motif 1 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cd12600
    Location:107 → 177
    RRM2_SRSF4_like; RNA recognition motif 2 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

  2. XM_026060952.1 → XP_025916737.1  serine/arginine-rich splicing factor 5 isoform X1

    Related
    ENSARWP00000001865.1, ENSARWT00000002198.1
    Conserved Domains (2) summary
    cd12337
    Location:5 → 71
    RRM1_SRSF4_like; RNA recognition motif 1 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    cd12600
    Location:107 → 177
    RRM2_SRSF4_like; RNA recognition motif 2 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
Nucleotide Protein
Heading Accession and Version

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