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IGDCC4 immunoglobulin superfamily DCC subclass member 4 [ Nothoprocta perdicaria ]

Gene ID: 112948329, updated on 15-Mar-2024

Summary

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Gene symbol
IGDCC4
Gene description
immunoglobulin superfamily DCC subclass member 4
See related
Ensembl:ENSNPEG00000008397
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothoprocta perdicaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455488.1 (3861260..3934210, complement)

NW_020455488.1Genomic Context describing neighboring genes Neighboring gene poly(ADP-ribose) polymerase family member 16 Neighboring gene immunoglobulin superfamily DCC subclass member 3 Neighboring gene dipeptidyl peptidase 8 Neighboring gene 3-hydroxyacyl-CoA dehydratase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020455488 Unplaced Scaffold Reference notPer1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily DCC subclass member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference notPer1

Genomic

  1. NW_020455488.1 Reference notPer1

    Range
    3861260..3934210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026040578.1 → XP_025896363.1  immunoglobulin superfamily DCC subclass member 4

    UniProtKB/TrEMBL
    A0A8C6ZGD4
    Related
    ENSNPEP00000011189.1, ENSNPET00000011475.1
    Conserved Domains (5) summary
    smart00410
    Location:252 → 333
    IG_like; Immunoglobulin like
    cd00063
    Location:430 → 523
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:634 → 727
    fn3; Fibronectin type III domain
    cd00096
    Location:165 → 230
    Ig; Immunoglobulin domain
    cl11960
    Location:344 → 423
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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