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EGR3 early growth response 3 [ Vulpes vulpes (red fox) ]

Gene ID: 112926813, updated on 15-Mar-2024

Summary

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Gene symbol
EGR3
Gene description
early growth response 3
See related
Ensembl:ENSVVUG00000005144
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356502.1 (9296817..9302206)

NW_020356502.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112926812 Neighboring gene Rho related BTB domain containing 2 Neighboring gene phosphatidylethanolamine binding protein 4 Neighboring gene bridging integrator 3 Neighboring gene cell cycle and apoptosis regulator 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356502 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
early growth response protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356502.1 Reference VulVul2.2 Primary Assembly

    Range
    9296817..9302206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026007931.1 → XP_025863716.1  early growth response protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7TDS1
    Conserved Domains (3) summary
    sd00017
    Location:277 → 299
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:275 → 299
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:319 → 344
    zf-H2C2_2; Zinc-finger double domain

  2. XM_026007930.1 → XP_025863715.1  early growth response protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7U8F8
    Conserved Domains (4) summary
    COG5048
    Location:249 → 305
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:223 → 245
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:221 → 245
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:265 → 290
    zf-H2C2_2; Zinc-finger double domain

  3. XM_026007932.1 → XP_025863717.1  early growth response protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A3Q7TR03
    Related
    ENSVVUP00000006634.1, ENSVVUT00000008848.1
    Conserved Domains (3) summary
    COG5048
    Location:265 → 338
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:239 → 261
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:281 → 306
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
Heading Accession and Version

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