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ERGIC1 endoplasmic reticulum-golgi intermediate compartment 1 [ Vulpes vulpes (red fox) ]

Gene ID: 112926130, updated on 15-Mar-2024

Summary

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Gene symbol
ERGIC1
Gene description
endoplasmic reticulum-golgi intermediate compartment 1
See related
Ensembl:ENSVVUG00000002261
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356437.1 (20569369..20661131, complement)

NW_020356437.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V0 subunit e1 Neighboring gene ribosomal protein L26 like 1 Neighboring gene dual specificity phosphatase 1 Neighboring gene uncharacterized LOC112926143

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356437 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoplasmic reticulum-Golgi intermediate compartment protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356437.1 Reference VulVul2.2 Primary Assembly

    Range
    20569369..20661131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026007071.1 → XP_025862856.1  endoplasmic reticulum-Golgi intermediate compartment protein 1

    UniProtKB/TrEMBL
    A0A3Q7T3N7
    Related
    ENSVVUP00000002885.1, ENSVVUT00000003995.1
    Conserved Domains (2) summary
    pfam07970
    Location:143 → 310
    COPIIcoated_ERV; Endoplasmic reticulum vesicle transporter
    pfam13850
    Location:47 → 137
    ERGIC_N; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
Nucleotide Protein Strain
Heading Accession and Version

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