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DDX21 DExD-box helicase 21 [ Vulpes vulpes (red fox) ]

Gene ID: 112923834, updated on 15-Mar-2024

Summary

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Gene symbol
DDX21
Gene description
DExD-box helicase 21
See related
Ensembl:ENSVVUG00000020486
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See DDX21 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356437.1 (1128917..1152808)

NW_020356437.1Genomic Context describing neighboring genes Neighboring gene storkhead box 1 Neighboring gene DExD-box helicase 50 Neighboring gene ubiquitin-conjugating enzyme E2 N-like Neighboring gene kinesin family binding protein Neighboring gene nucleolar and spindle-associated protein 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356437 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleolar RNA helicase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356437.1 Reference VulVul2.2 Primary Assembly

    Range
    1128917..1152808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026003717.1 → XP_025859502.1  nucleolar RNA helicase 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7TDP6
    Conserved Domains (3) summary
    COG0513
    Location:179 → 588
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd12936
    Location:618 → 710
    GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins
    cl28310
    Location:716 → 792
    Rho; Transcription termination factor Rho [Transcription]

  2. XM_026003719.1 → XP_025859504.1  nucleolar RNA helicase 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7SFH3
    Related
    ENSVVUP00000027956.1, ENSVVUT00000037121.1
    Conserved Domains (3) summary
    COG0513
    Location:179 → 588
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd12936
    Location:618 → 710
    GUCT_RHII_Gualpha_beta; RNA-binding GUCT domain found in vertebrate RNA helicase II/Gualpha (RH-II/Gualpha), RNA helicase II/Gubeta (RH-II/Gubeta) and similar proteins
    cl28310
    Location:711 → 782
    Rho; Transcription termination factor Rho [Transcription]
Nucleotide Protein Strain
Heading Accession and Version

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