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ZC3H12D zinc finger CCCH-type containing 12D [ Vulpes vulpes (red fox) ]

Gene ID: 112919510, updated on 15-Mar-2024

Summary

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Gene symbol
ZC3H12D
Gene description
zinc finger CCCH-type containing 12D
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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See ZC3H12D in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356461.1 (14637497..14661414, complement)

NW_020356461.1Genomic Context describing neighboring genes Neighboring gene uronyl 2-sulfotransferase Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 2 Neighboring gene 60S ribosomal protein L29 pseudogene Neighboring gene peptidylprolyl isomerase like 4 Neighboring gene glycosylated integral membrane protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356461 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-UTR-mediated mRNA destabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear-transcribed mRNA catabolic process, RNase MRP-dependent IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ribonuclease ZC3H12D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356461.1 Reference VulVul2.2 Primary Assembly

    Range
    14637497..14661414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025997984.1 → XP_025853769.1  probable ribonuclease ZC3H12D

    UniProtKB/TrEMBL
    A0A3Q7S4K9
    Conserved Domains (1) summary
    pfam11977
    Location:88 → 244
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain
Nucleotide Protein Strain
Heading Accession and Version

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