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STOML1 stomatin like 1 [ Vulpes vulpes (red fox) ]

Gene ID: 112906964, updated on 15-Mar-2024

Summary

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Gene symbol
STOML1
Gene description
stomatin like 1
See related
Ensembl:ENSVVUG00000018494
Gene type
protein coding
RefSeq status
MODEL
Organism
Vulpes vulpes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Vulpes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current VulVul2.2 (GCF_003160815.1) Unplaced Scaffold NW_020356435.1 (20027537..20038821, complement)

NW_020356435.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 21 Neighboring gene lysyl oxidase like 1 Neighboring gene PML nuclear body scaffold Neighboring gene immunoglobulin superfamily containing leucine rich repeat 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020356435 Unplaced Scaffold Reference VulVul2.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stomatin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vulpes vulpes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VulVul2.2 Primary Assembly

Genomic

  1. NW_020356435.1 Reference VulVul2.2 Primary Assembly

    Range
    20027537..20038821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025982268.1 → XP_025838053.1  stomatin-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q7S9S6
    Conserved Domains (2) summary
    cd13436
    Location:7 → 137
    SPFH_SLP-1; Stomatin-like protein 1 (SLP-1), a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    pfam02036
    Location:217 → 308
    SCP2; SCP-2 sterol transfer family

  2. XM_025982315.1 → XP_025838100.1  stomatin-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q7S9S6
    Conserved Domains (2) summary
    cd13436
    Location:7 → 137
    SPFH_SLP-1; Stomatin-like protein 1 (SLP-1), a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    pfam02036
    Location:217 → 308
    SCP2; SCP-2 sterol transfer family

  3. XM_025982205.1 → XP_025837990.1  stomatin-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7S9J0
    Conserved Domains (2) summary
    cd13436
    Location:94 → 224
    SPFH_SLP-1; Stomatin-like protein 1 (SLP-1), a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    pfam02036
    Location:303 → 394
    SCP2; SCP-2 sterol transfer family

  4. XM_025982136.1 → XP_025837921.1  stomatin-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7R794
    Related
    ENSVVUP00000025219.1, ENSVVUT00000033352.1
    Conserved Domains (2) summary
    cd13436
    Location:94 → 224
    SPFH_SLP-1; Stomatin-like protein 1 (SLP-1), a subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
    pfam02036
    Location:304 → 395
    SCP2; SCP-2 sterol transfer family
Nucleotide Protein Strain
Heading Accession and Version

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