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FNDC1 fibronectin type III domain containing 1 [ Puma concolor (puma) ]

Gene ID: 112862335, updated on 15-Mar-2024

Summary

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Gene symbol
FNDC1
Gene description
fibronectin type III domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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See FNDC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339445.1 (6223623..6330598, complement)

NW_020339445.1Genomic Context describing neighboring genes Neighboring gene U6atac minor spliceosomal RNA Neighboring gene WT1 associated protein Neighboring gene superoxide dismutase 2 Neighboring gene T cell activation RhoGTPase activating protein Neighboring gene radial spoke head 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339445 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fibronectin type III domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339445.1 Reference PumCon1.0 Primary Assembly

    Range
    6223623..6330598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025925619.1 → XP_025781404.1  fibronectin type III domain-containing protein 1

    UniProtKB/TrEMBL
    A0A6P6I0L6
    Conserved Domains (5) summary
    smart00060
    Location:40 → 120
    FN3; Fibronectin type 3 domain
    cd00063
    Location:1647 → 1738
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:362 → 447
    fn3; Fibronectin type III domain
    cl26464
    Location:620 → 1085
    Atrophin-1; Atrophin-1 family
    cl28033
    Location:435 → 750
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
Nucleotide Protein
Heading Accession and Version

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