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NFAT5 nuclear factor of activated T cells 5 [ Puma concolor (puma) ]

Gene ID: 112857254, updated on 15-Mar-2024

Summary

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Gene symbol
NFAT5
Gene description
nuclear factor of activated T cells 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020339221.1 (16851044..16963764, complement)

NW_020339221.1Genomic Context describing neighboring genes Neighboring gene NIN1 (RPN12) binding protein 1 homolog Neighboring gene NAD(P)H quinone dehydrogenase 1 Neighboring gene cytochrome b5 type B Neighboring gene telomeric repeat binding factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020339221 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcineurin-NFAT signaling cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear factor of activated T-cells 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020339221.1 Reference PumCon1.0 Primary Assembly

    Range
    16851044..16963764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025920550.1 → XP_025776335.1  nuclear factor of activated T-cells 5

    UniProtKB/TrEMBL
    A0A6P6HKJ9
    Conserved Domains (3) summary
    cd07882
    Location:298 → 458
    RHD-n_TonEBP; N-terminal sub-domain of the Rel homology domain (RHD) of tonicity-responsive enhancer binding protein (TonEBP)
    cd01178
    Location:462 → 561
    IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
    cl25764
    Location:1463 → 1639
    PAT1; Topoisomerase II-associated protein PAT1
Nucleotide Protein
Heading Accession and Version

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