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FDPS farnesyl diphosphate synthase [ Puma concolor (puma) ]

Gene ID: 112851818, updated on 15-Mar-2024

Summary

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Gene symbol
FDPS
Gene description
farnesyl diphosphate synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338563.1 (4156509..4166006, complement)

NW_020338563.1Genomic Context describing neighboring genes Neighboring gene ASH1 like histone lysine methyltransferase Neighboring gene complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene Neighboring gene RUN and SH3 domain containing 1 Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like Neighboring gene pyruvate kinase L/R

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338563 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dimethylallyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables geranyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in farnesyl diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338563.1 Reference PumCon1.0 Primary Assembly

    Range
    4156509..4166006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025915290.1 → XP_025771075.1  LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase

    UniProtKB/TrEMBL
    A0A6P6H5Q6
    Conserved Domains (1) summary
    pfam00348
    Location:128 → 381
    polyprenyl_synt; Polyprenyl synthetase
Nucleotide Protein
Heading Accession and Version

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