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SCN1B sodium voltage-gated channel beta subunit 1 [ Puma concolor (puma) ]

Gene ID: 112851059, updated on 15-Mar-2024

Summary

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Gene symbol
SCN1B
Gene description
sodium voltage-gated channel beta subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Puma concolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current PumCon1.0 (GCF_003327715.1) Unplaced Scaffold NW_020338385.1 (5466662..5472830)

NW_020338385.1Genomic Context describing neighboring genes Neighboring gene methyltransferase-like protein 2A Neighboring gene GRAM domain containing 1A Neighboring gene hepsin Neighboring gene FXYD domain containing ion transport regulator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020338385 Unplaced Scaffold Reference PumCon1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle cell action potential involved in contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of heart rate by cardiac conduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of voltage-gated sodium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium channel subunit beta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Puma concolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PumCon1.0 Primary Assembly

Genomic

  1. NW_020338385.1 Reference PumCon1.0 Primary Assembly

    Range
    5466662..5472830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025914595.1 → XP_025770380.1  sodium channel subunit beta-1

    UniProtKB/TrEMBL
    A0A6P6H3R2
    Conserved Domains (1) summary
    pfam07686
    Location:8 → 114
    V-set; Immunoglobulin V-set domain
Nucleotide Protein
Heading Accession and Version

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