U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNX1 sorting nexin 1 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112833248, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SNX1
Gene description
sorting nexin 1
See related
EnsemblRapid:ENSCURG00000011980
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020312912.1 (30480306..30514556)

NW_020312912.1Genomic Context describing neighboring genes Neighboring gene death associated protein kinase 2 Neighboring gene synapsin-1-like Neighboring gene cytosolic iron-sulfur assembly component 2A Neighboring gene sorting nexin 22 Neighboring gene peptidylprolyl isomerase B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020312912 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sorting nexin-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020312912.1 Reference ASM326570v1 Primary Assembly

    Range
    30480306..30514556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025884298.1 → XP_025740083.1  sorting nexin-1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7Q2E4
    Related
    ENSCURP00000019291.1, ENSCURT00000022309.1
    Conserved Domains (3) summary
    cd07281
    Location:95 → 218
    PX_SNX1; The phosphoinositide binding Phox Homology domain of Sorting Nexin 1
    pfam03700
    Location:3 → 79
    Sorting_nexin; Sorting nexin, N-terminal domain
    cl12013
    Location:236 → 469
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

  2. XM_025884297.1 → XP_025740082.1  sorting nexin-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7QD26
    Related
    ENSCURP00000019301.1, ENSCURT00000022320.1
    Conserved Domains (3) summary
    cd07281
    Location:143 → 266
    PX_SNX1; The phosphoinositide binding Phox Homology domain of Sorting Nexin 1
    cd07665
    Location:284 → 517
    BAR_SNX1; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1
    pfam03700
    Location:67 → 127
    Sorting_nexin; Sorting nexin, N-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.