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BCL6B BCL6B transcription repressor [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112817167, updated on 15-Mar-2024

Summary

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Gene symbol
BCL6B
Gene description
BCL6B transcription repressor
See related
EnsemblRapid:ENSCURG00000028379
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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See BCL6B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020313450.1 (2117474..2123964)

NW_020313450.1Genomic Context describing neighboring genes Neighboring gene ribonuclease K Neighboring gene BPTF associated chromatin complex component 1 Neighboring gene solute carrier family 16 member 13 Neighboring gene solute carrier family 16 member 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020313450 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell CLL/lymphoma 6 member B protein
Names
B cell CLL/lymphoma 6B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020313450.1 Reference ASM326570v1 Primary Assembly

    Range
    2117474..2123964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025864166.1 → XP_025719951.1  B-cell CLL/lymphoma 6 member B protein

    UniProtKB/TrEMBL
    A0A3Q7PV96
    Related
    ENSCURP00000045961.1, ENSCURT00000052041.1
    Conserved Domains (4) summary
    COG5189
    Location:298 → 432
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:327 → 347
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:28 → 134
    BTB; BTB/POZ domain
    pfam13465
    Location:424 → 448
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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