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EPHB6 EPH receptor B6 [ Callorhinus ursinus (northern fur seal) ]

Gene ID: 112810989, updated on 11-Apr-2024

Summary

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Gene symbol
EPHB6
Gene description
EPH receptor B6
See related
EnsemblRapid:ENSCURG00000022046
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinus ursinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Callorhinus
Orthologs
human mouse all
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Genomic context

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See EPHB6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM326570v1 (GCF_003265705.1) Unplaced Scaffold NW_020313069.1 (5648734..5662842, complement)

NW_020313069.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily V member 5 Neighboring gene transient receptor potential cation channel subfamily V member 6 Neighboring gene T-cell receptor beta-1 chain C region-like Neighboring gene serine protease 2 Neighboring gene uncharacterized LOC112811052 Neighboring gene T cell receptor beta variable 19-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020313069 Unplaced Scaffold Reference ASM326570v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane-ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system projection neuron axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin type-B receptor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinus ursinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM326570v1 Primary Assembly

Genomic

  1. NW_020313069.1 Reference ASM326570v1 Primary Assembly

    Range
    5648734..5662842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025854898.1 → XP_025710683.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7MU66
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:938 → 1006
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 912
    PKc_like; Protein Kinases, catalytic domain

  2. XM_025854897.1 → XP_025710682.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7MU66
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:938 → 1006
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 912
    PKc_like; Protein Kinases, catalytic domain

  3. XM_025854896.1 → XP_025710681.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7MU66
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:938 → 1006
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 912
    PKc_like; Protein Kinases, catalytic domain

  4. XM_025854892.1 → XP_025710677.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7MU66
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:938 → 1006
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 912
    PKc_like; Protein Kinases, catalytic domain

  5. XM_025854893.1 → XP_025710678.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7MU66
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:938 → 1006
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 912
    PKc_like; Protein Kinases, catalytic domain

  6. XM_025854895.1 → XP_025710680.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7MU66
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:938 → 1006
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 912
    PKc_like; Protein Kinases, catalytic domain

  7. XM_025854894.1 → XP_025710679.1  ephrin type-B receptor 6 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7MU66
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:938 → 1006
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 912
    PKc_like; Protein Kinases, catalytic domain

  8. XM_025854899.1 → XP_025710684.1  ephrin type-B receptor 6 isoform X2

    UniProtKB/TrEMBL
    A0A3Q7MU70
    Related
    ENSCURP00000035837.1, ENSCURT00000040944.1
    Conserved Domains (6) summary
    cd10475
    Location:33 → 223
    EphR_LBD_B6; Ligand Binding Domain of Ephrin type-B Receptor 6
    cd00185
    Location:292 → 359
    TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    pfam00041
    Location:481 → 563
    fn3; Fibronectin type III domain
    pfam14575
    Location:604 → 657
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    cl15755
    Location:937 → 1005
    SAM_superfamily; SAM (Sterile alpha motif )
    cl21453
    Location:657 → 911
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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