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LARP4B La ribonucleoprotein 4B [ Canis lupus dingo (dingo) ]

Gene ID: 112658790, updated on 15-Mar-2024

Summary

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Gene symbol
LARP4B
Gene description
La ribonucleoprotein 4B
See related
Ensembl:ENSCAFG00020004209
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
21
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 2 NC_064244.1 (32564155..32658290)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 2 Unlocalized Scaffold NW_023365054.1 (33863675..33957825)

Chromosome 2 - NC_064244.1Genomic Context describing neighboring genes Neighboring gene GTP binding protein 4 Neighboring gene isopentenyl-diphosphate delta isomerase 1 Neighboring gene disco interacting protein 2 homolog C Neighboring gene 60S ribosomal protein L17-like Neighboring gene zinc finger MYND-type containing 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
la-related protein 4B
Names
La ribonucleoprotein domain family member 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064244.1 Reference ASM325472v2

    Range
    32564155..32658290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025445042.3 → XP_025300827.1  la-related protein 4B isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q263, A0A8C0QV76, A0A8C0RWB3, A0A8I3MCJ6
    Conserved Domains (2) summary
    cd08031
    Location:158 → 232
    LARP_4_5_like; La RNA-binding domain of proteins similar to La-related proteins 4 and 5
    cd12706
    Location:237 → 313
    RRM_LARP5; RNA recognition motif (RRM) found in vertebrate La-related protein 5 (LARP5 or LARP4B)

  2. XM_025445040.3 → XP_025300825.1  la-related protein 4B isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q263, A0A8C0QV76, A0A8C0RWB3, A0A8I3MCJ6
    Related
    ENSCAFP00020005239.1
    Conserved Domains (2) summary
    cd08031
    Location:158 → 232
    LARP_4_5_like; La RNA-binding domain of proteins similar to La-related proteins 4 and 5
    cd12706
    Location:237 → 313
    RRM_LARP5; RNA recognition motif (RRM) found in vertebrate La-related protein 5 (LARP5 or LARP4B)

  3. XM_025445041.3 → XP_025300826.1  la-related protein 4B isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q263, A0A8C0QV76, A0A8C0RWB3, A0A8I3MCJ6
    Conserved Domains (2) summary
    cd08031
    Location:158 → 232
    LARP_4_5_like; La RNA-binding domain of proteins similar to La-related proteins 4 and 5
    cd12706
    Location:237 → 313
    RRM_LARP5; RNA recognition motif (RRM) found in vertebrate La-related protein 5 (LARP5 or LARP4B)

  4. XM_025445039.3 → XP_025300824.1  la-related protein 4B isoform X1

    UniProtKB/TrEMBL
    A0A8C0PTU4, A0A8I3MB38
    Conserved Domains (2) summary
    cd08036
    Location:1115 → 1189
    LARP_5; La RNA-binding domain of La-related protein 5
    cd12706
    Location:1194 → 1270
    RRM_LARP5; RNA recognition motif in vertebrate La-related protein 5 (LARP5 or LARP4B)
Nucleotide Protein
Heading Accession and Version

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