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DCAF6 DDB1 and CUL4 associated factor 6 [ Canis lupus dingo (dingo) ]

Gene ID: 112648685, updated on 6-Jun-2024

Summary

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Gene symbol
DCAF6
Gene description
DDB1 and CUL4 associated factor 6
See related
Ensembl:ENSCAFG00020022722
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 7 NC_064249.1 (30083601..30214754, complement)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 7 Unlocalized Scaffold NW_023365116.1 (30982736..31113889, complement)

Chromosome 7 - NC_064249.1Genomic Context describing neighboring genes Neighboring gene SFT2 domain containing 2 Neighboring gene TOR signaling pathway regulator Neighboring gene G protein-coupled receptor 161 Neighboring gene uncharacterized LOC118355334 Neighboring gene uncharacterized LOC125755419 Neighboring gene mitochondrial pyruvate carrier 2 Neighboring gene adenylate cyclase 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064249.1 Reference ASM325472v2

    Range
    30083601..30214754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049112350.1 → XP_048968307.1  DDB1- and CUL4-associated factor 6 isoform X6

    UniProtKB/TrEMBL
    A0A8C0P857

  2. XM_035719373.2 → XP_035575266.1  DDB1- and CUL4-associated factor 6 isoform X2

    UniProtKB/TrEMBL
    A0A8C0P857
    Conserved Domains (3) summary
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    NF033913
    Location:547 → 708
    fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_025430457.3 → XP_025286242.1  DDB1- and CUL4-associated factor 6 isoform X4

    UniProtKB/TrEMBL
    A0A8C0P857
    Conserved Domains (3) summary
    PRK08581
    Location:498 → 712
    PRK08581; amidase domain-containing protein
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_025430453.3 → XP_025286238.1  DDB1- and CUL4-associated factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P857, A0A8C0Q679, A0A8I3RSL6
    Conserved Domains (3) summary
    PRK08581
    Location:498 → 727
    PRK08581; amidase domain-containing protein
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_035719376.2 → XP_035575269.1  DDB1- and CUL4-associated factor 6 isoform X9

    UniProtKB/TrEMBL
    A0A8C0P819, A0A8I3MQ66, A0A8P0NW69
    Conserved Domains (3) summary
    PRK08581
    Location:375 → 653
    PRK08581; amidase domain-containing protein
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_025430458.3 → XP_025286243.1  DDB1- and CUL4-associated factor 6 isoform X8

    UniProtKB/TrEMBL
    A0A8C0P819, A0A8C0PWV6
    Conserved Domains (3) summary
    PRK08581
    Location:375 → 654
    PRK08581; amidase domain-containing protein
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_049112349.1 → XP_048968306.1  DDB1- and CUL4-associated factor 6 isoform X5

    UniProtKB/TrEMBL
    A0A8C0P857

  8. XM_025430460.3 → XP_025286245.1  DDB1- and CUL4-associated factor 6 isoform X12

    UniProtKB/TrEMBL
    A0A8C0PK14, A0A8C0PZ66, A0A8I3MJ73
    Conserved Domains (3) summary
    PRK14949
    Location:289 → 651
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  9. XM_035719375.2 → XP_035575268.1  DDB1- and CUL4-associated factor 6 isoform X7

    UniProtKB/TrEMBL
    A0A8C0P857
    Conserved Domains (3) summary
    PRK08581
    Location:498 → 712
    PRK08581; amidase domain-containing protein
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  10. XM_025430456.3 → XP_025286241.1  DDB1- and CUL4-associated factor 6 isoform X3

    UniProtKB/TrEMBL
    A0A8C0P857
    Conserved Domains (3) summary
    PRK08581
    Location:498 → 727
    PRK08581; amidase domain-containing protein
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  11. XM_049112351.1 → XP_048968308.1  DDB1- and CUL4-associated factor 6 isoform X11

    UniProtKB/TrEMBL
    A0A8C0P819

  12. XM_025430461.3 → XP_025286246.1  DDB1- and CUL4-associated factor 6 isoform X13

    UniProtKB/TrEMBL
    A0A8C0PK14, A0A8C0R633
    Related
    ENSCAFP00020029065.1
    Conserved Domains (3) summary
    PRK14949
    Location:289 → 651
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  13. XM_025430459.3 → XP_025286244.1  DDB1- and CUL4-associated factor 6 isoform X10

    UniProtKB/TrEMBL
    A0A8C0LB57, A0A8C0P819
    Related
    ENSCAFP00020029064.1
    Conserved Domains (3) summary
    PRK08581
    Location:375 → 654
    PRK08581; amidase domain-containing protein
    sd00039
    Location:55 → 92
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:43 → 292
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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