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ZNF484 zinc finger protein 484 [ Canis lupus dingo (dingo) ]

Gene ID: 112644914, updated on 15-Mar-2024

Summary

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Gene symbol
ZNF484
Gene description
zinc finger protein 484
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus dingo (sub-species: dingo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM325472v2 (GCF_003254725.2) 1 NC_064243.1 (99301823..99346374)
101 previous assembly UNSW_AlpineDingo_1.0 (GCF_012295265.1) 1 Unlocalized Scaffold NW_023365038.1 (99865032..99909596)

Chromosome 1 - NC_064243.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA84 Neighboring gene isoleucyl-tRNA synthetase 1 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC118350747 Neighboring gene major facilitator superfamily domain containing 14B Neighboring gene uncharacterized LOC112644917 Neighboring gene uncharacterized LOC118352869

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 484

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus dingo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM325472v2

Genomic

  1. NC_064243.1 Reference ASM325472v2

    Range
    99301823..99346374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049093299.1 → XP_048949256.1  zinc finger protein 484 isoform X1

  2. XM_025423691.3 → XP_025279476.1  zinc finger protein 484 isoform X1

    Conserved Domains (3) summary
    smart00349
    Location:13 → 68
    KRAB; krueppel associated box
    COG5048
    Location:419 → 803
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:703 → 723
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_025423689.3 → XP_025279474.1  zinc finger protein 484 isoform X1

    Conserved Domains (3) summary
    smart00349
    Location:13 → 68
    KRAB; krueppel associated box
    COG5048
    Location:419 → 803
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:703 → 723
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_025423692.3 → XP_025279477.1  zinc finger protein 484 isoform X1

    Conserved Domains (3) summary
    smart00349
    Location:13 → 68
    KRAB; krueppel associated box
    COG5048
    Location:419 → 803
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:703 → 723
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_025423701.3 → XP_025279486.1  zinc finger protein 484 isoform X4

    Conserved Domains (2) summary
    COG5048
    Location:348 → 721
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:632 → 652
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_049093304.1 → XP_048949261.1  zinc finger protein 484 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MJT7, A0A8P0NNN7

  7. XM_035699051.2 → XP_035554944.1  zinc finger protein 484 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MJT7, A0A8P0NNN7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 63
    KRAB; krueppel associated box
    COG5048
    Location:414 → 798
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:698 → 718
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_025423693.3 → XP_025279478.1  zinc finger protein 484 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MJT7, A0A8P0NNN7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 63
    KRAB; krueppel associated box
    COG5048
    Location:414 → 798
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:698 → 718
    ZF_C2H2; C2H2 Zn finger [structural motif]

  9. XM_025423699.3 → XP_025279484.1  zinc finger protein 484 isoform X4

    Conserved Domains (2) summary
    COG5048
    Location:348 → 721
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:632 → 652
    ZF_C2H2; C2H2 Zn finger [structural motif]

  10. XM_049093311.1 → XP_048949268.1  zinc finger protein 484 isoform X3

  11. XM_025423697.3 → XP_025279482.1  zinc finger protein 484 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MJT7, A0A8P0NNN7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 63
    KRAB; krueppel associated box
    COG5048
    Location:414 → 798
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:698 → 718
    ZF_C2H2; C2H2 Zn finger [structural motif]

  12. XM_035699057.2 → XP_035554950.1  zinc finger protein 484 isoform X5

    UniProtKB/TrEMBL
    A0A8C0KPI2
    Conserved Domains (2) summary
    COG5048
    Location:324 → 697
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:608 → 628
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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