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PALLD palladin, cytoskeletal associated protein [ Theropithecus gelada (gelada) ]

Gene ID: 112624229, updated on 15-Mar-2024

Summary

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Gene symbol
PALLD
Gene description
palladin, cytoskeletal associated protein
See related
Ensembl:ENSTGEG00000021062
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human mouse all
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Genomic context

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See PALLD in Genome Data Viewer
Location:
chromosome: 5
Exon count:
28
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) 5 NC_037672.1 (165358808..165795733)

Chromosome 5 - NC_037672.1Genomic Context describing neighboring genes Neighboring gene DExD/H-box helicase 60 Neighboring gene small nucleolar RNA U13 Neighboring gene DExD/H-box 60 like Neighboring gene small nucleolar RNA SNORA51 Neighboring gene transcription factor BTF3 homolog 4 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene RNMT-activating mini protein pseudogene Neighboring gene carbonyl reductase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037672.1 Chromosome 5 Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendrite self-avoidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palladin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037672.1 Reference Tgel_1.0 Primary Assembly

    Range
    165358808..165795733
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025384605.1 → XP_025240390.1  palladin isoform X2

    UniProtKB/TrEMBL
    A0A8D2FY47
    Related
    ENSTGEP00000026146.1, ENSTGET00000031138.1
    Conserved Domains (2) summary
    cd05893
    Location:1045 → 1119
    Ig_Palladin_C; C-terminal immunoglobulin (Ig)-like domain of palladin
    pfam07679
    Location:272 → 362
    I-set; Immunoglobulin I-set domain

  2. XM_025384606.1 → XP_025240391.1  palladin isoform X3

    UniProtKB/TrEMBL
    A0A8D2FUX2
    Related
    ENSTGEP00000026149.1, ENSTGET00000031141.1
    Conserved Domains (2) summary
    cd05893
    Location:1028 → 1102
    Ig_Palladin_C; C-terminal immunoglobulin (Ig)-like domain of palladin
    pfam07679
    Location:272 → 362
    I-set; Immunoglobulin I-set domain

  3. XM_025384604.1 → XP_025240389.1  palladin isoform X1

    Conserved Domains (2) summary
    cd05893
    Location:1333 → 1407
    Ig_Palladin_C; C-terminal immunoglobulin (Ig)-like domain of palladin
    pfam07679
    Location:351 → 441
    I-set; Immunoglobulin I-set domain

  4. XM_025384607.1 → XP_025240392.1  palladin isoform X4

    Conserved Domains (2) summary
    cd05893
    Location:645 → 719
    Ig_Palladin_C; C-terminal immunoglobulin (Ig)-like domain of palladin
    pfam07679
    Location:529 → 619
    I-set; Immunoglobulin I-set domain

  5. XM_025384608.1 → XP_025240393.1  palladin isoform X5

    UniProtKB/TrEMBL
    A0A8D2FQ16
    Related
    ENSTGEP00000026150.1, ENSTGET00000031143.1
    Conserved Domains (2) summary
    cd05893
    Location:539 → 613
    Ig_Palladin_C; C-terminal immunoglobulin (Ig)-like domain of palladin
    pfam07679
    Location:423 → 513
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
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