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UBE3D ubiquitin protein ligase E3D [ Theropithecus gelada (gelada) ]

Gene ID: 112622843, updated on 15-Mar-2024

Summary

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Gene symbol
UBE3D
Gene description
ubiquitin protein ligase E3D
See related
Ensembl:ENSTGEG00000016904
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) 4 NC_037671.1 (81831861..82011748, complement)

Chromosome 4 - NC_037671.1Genomic Context describing neighboring genes Neighboring gene single-stranded DNA-binding protein 2 pseudogene Neighboring gene trophoblast glycoprotein Neighboring gene DOP1 leucine zipper like protein A Neighboring gene RWD domain containing 2A Neighboring gene phosphoglucomutase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037671.1 Chromosome 4 Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein autoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein monoubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase E3D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037671.1 Reference Tgel_1.0 Primary Assembly

    Range
    81831861..82011748 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025382815.1 → XP_025238600.1  E3 ubiquitin-protein ligase E3D isoform X2

    Conserved Domains (1) summary
    pfam09814
    Location:75 → 345
    HECT_2; HECT-like Ubiquitin-conjugating enzyme (E2)-binding

  2. XM_025382817.1 → XP_025238602.1  E3 ubiquitin-protein ligase E3D isoform X3

    Conserved Domains (1) summary
    pfam09814
    Location:5 → 190
    HECT_2; HECT-like Ubiquitin-conjugating enzyme (E2)-binding

  3. XM_025382816.1 → XP_025238601.1  E3 ubiquitin-protein ligase E3D isoform X3

    Conserved Domains (1) summary
    pfam09814
    Location:5 → 190
    HECT_2; HECT-like Ubiquitin-conjugating enzyme (E2)-binding

  4. XM_025382814.1 → XP_025238599.1  E3 ubiquitin-protein ligase E3D isoform X2

    Conserved Domains (1) summary
    pfam09814
    Location:75 → 345
    HECT_2; HECT-like Ubiquitin-conjugating enzyme (E2)-binding

  5. XM_025382813.1 → XP_025238598.1  E3 ubiquitin-protein ligase E3D isoform X1

    UniProtKB/TrEMBL
    A0A8D2FH48
    Related
    ENSTGEP00000020979.1, ENSTGET00000025003.1
    Conserved Domains (1) summary
    pfam09814
    Location:107 → 377
    HECT_2; HECT-like Ubiquitin-conjugating enzyme (E2)-binding
Nucleotide Protein
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