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UBD ubiquitin D [ Theropithecus gelada (gelada) ]

Gene ID: 112622753, updated on 15-Mar-2024

Summary

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Gene symbol
UBD
Gene description
ubiquitin D
Gene type
protein coding
RefSeq status
MODEL
Organism
Theropithecus gelada
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Tgel_1.0 (GCF_003255815.1) 4 NC_037671.1 (32403779..32407324, complement)

Chromosome 4 - NC_037671.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112623326 Neighboring gene putative olfactory receptor 2I1 Neighboring gene olfactory receptor 2H2 Neighboring gene uncharacterized LOC112622554 Neighboring gene small nucleolar RNA Z195/SNORD33/SNORD32 family Neighboring gene gamma-aminobutyric acid type B receptor subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037671.1 Chromosome 4 Reference Tgel_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to tumor necrosis factor IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to type II interferon IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theropithecus gelada Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tgel_1.0 Primary Assembly

Genomic

  1. NC_037671.1 Reference Tgel_1.0 Primary Assembly

    Range
    32403779..32407324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025382565.1 → XP_025238350.1  ubiquitin D

    UniProtKB/TrEMBL
    A0A8D2EGQ1, A0A8D2K634
    Conserved Domains (2) summary
    smart00213
    Location:8 → 79
    UBQ; Ubiquitin homologues
    cl25424
    Location:99 → 158
    TGS; The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is structurally similar to ubiquitin. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information ...
Nucleotide Protein
Heading Accession and Version

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