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ZNF318 zinc finger protein 318 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112413843, updated on 15-Mar-2024

Summary

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Gene symbol
ZNF318
Gene description
zinc finger protein 318
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020175393.1 (9791281..9818136, complement)

NW_020175393.1Genomic Context describing neighboring genes Neighboring gene tau tubulin kinase 1 Neighboring gene solute carrier family 22 member 7 Neighboring gene cysteine rich protein 3 Neighboring gene RWD domain-containing protein 1-like Neighboring gene ATP binding cassette subfamily C member 10 Neighboring gene delta like non-canonical Notch ligand 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020175393 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 318

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020175393.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    9791281..9818136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024765978.1 → XP_024621746.1  zinc finger protein 318 isoform X1

    UniProtKB/TrEMBL
    A0A341D3Z6
    Conserved Domains (3) summary
    smart00451
    Location:1002 → 1036
    ZnF_U1; U1-like zinc finger
    cl26511
    Location:744 → 1135
    Neuromodulin_N; Gap junction protein N-terminal region
    cl27975
    Location:552 → 744
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

  2. XM_024765980.1 → XP_024621748.1  zinc finger protein 318 isoform X2

    UniProtKB/TrEMBL
    A0A341D431
    Conserved Domains (3) summary
    smart00451
    Location:932 → 961
    ZnF_U1; U1-like zinc finger
    cl25732
    Location:749 → 848
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27975
    Location:552 → 744
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)

  3. XM_024765979.1 → XP_024621747.1  zinc finger protein 318 isoform X2

    UniProtKB/TrEMBL
    A0A341D431
    Conserved Domains (3) summary
    smart00451
    Location:932 → 961
    ZnF_U1; U1-like zinc finger
    cl25732
    Location:749 → 848
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27975
    Location:552 → 744
    EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
Nucleotide Protein
Heading Accession and Version

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