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EPHA4 EPH receptor A4 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112411891, updated on 11-Apr-2024

Summary

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Gene symbol
EPHA4
Gene description
EPH receptor A4
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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See EPHA4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020175039.1 (3112336..3256743)

NW_020175039.1Genomic Context describing neighboring genes Neighboring gene ras association domain-containing protein 6-like Neighboring gene ATP synthase subunit beta, mitochondrial pseudogene Neighboring gene 40S ribosomal protein S16-like Neighboring gene 40S ribosomal protein S29 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020175039 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane-ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin type-A receptor 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020175039.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    3112336..3256743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024763269.1 → XP_024619037.1  ephrin type-A receptor 4 isoform X1

    UniProtKB/TrEMBL
    A0A341CYV2
    Conserved Domains (5) summary
    cd09545
    Location:911 → 981
    SAM_EPH-A4; SAM domain of EPH-A4 subfamily of tyrosine kinase receptors
    cd10482
    Location:30 → 203
    EphR_LBD_A4; Ligand Binding Domain of Ephrin type-A Receptor 4
    cd00063
    Location:441 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd05066
    Location:616 → 882
    PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
    pfam14575
    Location:552 → 616
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain

  2. XM_024763270.1 → XP_024619038.1  ephrin type-A receptor 4 isoform X2

    UniProtKB/TrEMBL
    A0A341CWC9
    Conserved Domains (4) summary
    cd10482
    Location:30 → 203
    EphR_LBD_A4; Ligand Binding Domain of Ephrin type-A Receptor 4
    cd00063
    Location:441 → 532
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd05066
    Location:616 → 882
    PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
    pfam14575
    Location:548 → 618
    EphA2_TM; Ephrin type-A receptor 2 transmembrane domain

  3. XM_024763271.1 → XP_024619039.1  ephrin type-A receptor 4 isoform X3

    UniProtKB/TrEMBL
    A0A341CWC7
    Conserved Domains (2) summary
    cd10482
    Location:30 → 203
    EphR_LBD_A4; Ligand Binding Domain of Ephrin type-A Receptor 4
    pfam07699
    Location:271 → 306
    Ephrin_rec_like; Putative ephrin-receptor like
Nucleotide Protein
Heading Accession and Version

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