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NTM neurotrimin [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112407520, updated on 15-Mar-2024

Summary

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Gene symbol
NTM
Gene description
neurotrimin
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020174430.1 (1138888..2056199)

NW_020174430.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene sorting nexin 19 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene opioid binding protein/cell adhesion molecule like Neighboring gene U5 spliceosomal RNA Neighboring gene spermatogenesis associated 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020174430 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurotrimin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020174430.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    1138888..2056199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024756859.1 → XP_024612627.1  neurotrimin isoform X5

    UniProtKB/TrEMBL
    A0A341CFF3
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  2. XM_024756856.1 → XP_024612624.1  neurotrimin isoform X2

    UniProtKB/TrEMBL
    A0A341CDG2
    Conserved Domains (3) summary
    smart00409
    Location:233 → 310
    IG; Immunoglobulin
    pfam13927
    Location:136 → 205
    Ig_3; Immunoglobulin domain
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  3. XM_024756855.1 → XP_024612623.1  neurotrimin isoform X1

    UniProtKB/TrEMBL
    A0A341CDR0
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  4. XM_024756857.1 → XP_024612625.1  neurotrimin isoform X3

    UniProtKB/TrEMBL
    A0A341CD59
    Conserved Domains (3) summary
    smart00409
    Location:233 → 310
    IG; Immunoglobulin
    pfam13927
    Location:136 → 205
    Ig_3; Immunoglobulin domain
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain

  5. XM_024756858.1 → XP_024612626.1  neurotrimin isoform X4

    UniProtKB/TrEMBL
    A0A341CCX1
    Conserved Domains (3) summary
    pfam13927
    Location:222 → 299
    Ig_3; Immunoglobulin domain
    cd00096
    Location:223 → 229
    Ig; putative Ig strand A [structural motif]
    cl11960
    Location:44 → 132
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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