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ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif 7 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112405771, updated on 15-Mar-2024

Summary

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Gene symbol
ADAMTS7
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020174055.1 (525787..581030, complement)

NW_020174055.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112405767 Neighboring gene U6 spliceosomal RNA Neighboring gene TBC1 domain family member 2B Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene OTU deubiquitinase 7A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020174055 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020174055.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    525787..581030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024754302.1 → XP_024610070.1  A disintegrin and metalloproteinase with thrombospondin motifs 7

    UniProtKB/TrEMBL
    A0A341C5E7
    Conserved Domains (6) summary
    smart00209
    Location:541 → 593
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:242 → 449
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01562
    Location:44 → 184
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:699 → 809
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:493 → 530
    ADAM_CR; ADAM cysteine-rich
    cl26464
    Location:1082 → 1453
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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