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ZSWIM8 zinc finger SWIM-type containing 8 [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112396867, updated on 15-Mar-2024

Summary

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Gene symbol
ZSWIM8
Gene description
zinc finger SWIM-type containing 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020171830.1 (2597900..2611786, complement)

NW_020171830.1Genomic Context describing neighboring genes Neighboring gene calcium/calmodulin dependent protein kinase II gamma Neighboring gene N-deacetylase and N-sulfotransferase 2 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 1 Neighboring gene fucosyltransferase 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020171830 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger SWIM domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020171830.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    2597900..2611786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024740826.1 → XP_024596594.1  zinc finger SWIM domain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A341B355
    Conserved Domains (1) summary
    cl26464
    Location:1192 → 1447
    Atrophin-1; Atrophin-1 family

  2. XM_024740817.1 → XP_024596585.1  zinc finger SWIM domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A341B1B6
    Conserved Domains (1) summary
    cl26464
    Location:1532 → 1686
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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