U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SYBU syntabulin [ Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise) ]

Gene ID: 112396157, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SYBU
Gene description
syntabulin
Gene type
protein coding
RefSeq status
MODEL
Organism
Neophocaena asiaeorientalis asiaeorientalis (sub-species: asiaeorientalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Neophocaena
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SYBU in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Neophocaena_asiaeorientalis_V1 (GCF_003031525.1) Unplaced Scaffold NW_020172677.1 (874245..945785, complement)

NW_020172677.1Genomic Context describing neighboring genes Neighboring gene PKHD1 like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene estrogen receptor binding site associated antigen 9 Neighboring gene U6 spliceosomal RNA Neighboring gene SYBU antisense RNA 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020172677 Unplaced Scaffold Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axonal transport of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
syntabulin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neophocaena asiaeorientalis asiaeorientalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

Genomic

  1. NW_020172677.1 Reference Neophocaena_asiaeorientalis_V1 Primary Assembly

    Range
    874245..945785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024739732.1 → XP_024595500.1  syntabulin isoform X3

    UniProtKB/TrEMBL
    A0A341AYD4
    Conserved Domains (1) summary
    pfam15290
    Location:234 → 423
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  2. XM_024739730.1 → XP_024595498.1  syntabulin isoform X1

    UniProtKB/TrEMBL
    A0A341B115
    Conserved Domains (1) summary
    pfam15290
    Location:254 → 443
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  3. XM_024739733.1 → XP_024595501.1  syntabulin isoform X4

    UniProtKB/TrEMBL
    A0A341AYD5
    Conserved Domains (1) summary
    pfam15290
    Location:233 → 422
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  4. XM_024739731.1 → XP_024595499.1  syntabulin isoform X2

    UniProtKB/TrEMBL
    A0A341AZU7
    Conserved Domains (1) summary
    pfam15290
    Location:253 → 442
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.